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  • 转录因子的靶基因，看这一个数据库就够——Harmonizonme
    对于转录因子而言，我们最想知道的信息就是其对应的靶基因。转录因子相关数据库非常的多，有些数据库直接提供了靶基因的信息，比如TRANSFAC, 有些数据库只提供了motif的信息，比如JASPAR, 我们只能通过软件预测在基因的启动子序列上是否有对应的motif, 从而识别转录因子的靶基因。 TRANSFAC收费，而
  • 小白实战课堂！转录因子的候选靶基因查询～～_数据库
    一文学会Harmonizonme和hTFtarget数据库使用方法 嗨，小伙伴们大家好！这里是每周一弘毅专栏，我志向用小小文字助力你的SCI发表之路。接上周话题，转录因子相关课题经常遇到的两个问题，一是已知靶基因寻找它上游的转录因子？二是已知转录因子寻找它可能的靶基因？前一个问题上周已经给大家做
  • Harmonizome - Database Commons
    Harmonizome 3 0: integrated knowledge about genes and proteins from diverse multi-omics resources [PMID: 39565209]
  • Harmonizome 3. 0: integrated knowledge about genes and proteins from . . .
    Abstract By processing and abstracting diverse omics datasets into associations between genes and their attributes, the Harmonizome database enables researchers to explore and integrate knowledge about human genes from many central omics resources Here, we introduce Harmonizome 3 0, a significant upgrade to the original Harmonizome database The upgrade adds 26 datasets that contribute nearly
  • Harmonizome数据库 – 一个集合多种pathway（or other）的网站
    Harmonizome是一个综合性的数据库，汇集了基因、蛋白质等多种生物信息数据，提供KEGG、Reactome等知名数据库的链接。尽管内容全面，但更新不及时且数据量有限。建议用于初步研究，后续可直接访问特定数据库获取最新信息。Reactome数据库以数据量大著称，提供704个Pathway，但下载的gene sets理解难度
  • Harmonizome
    Please acknowledge the Harmonizome in your publications by citing the following reference: Rouillard AD, Gundersen GW, Fernandez NF, Wang Z, Monteiro CD, McDermott MG, Ma'ayan A The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins Database (Oxford) 2016 Jul 3;2016 pii: baw100
  • The harmonizome: a collection of processed datasets gathered . . . - PubMed
    Genomics, epigenomics, transcriptomics, proteomics and metabolomics efforts rapidly generate a plethora of data on the activity and levels of biomolecules within mammalian cells At the same time, curation projects that organize knowledge from the biomedical literature into online databases are expa …
  • Harmonizome - CDRL
    Harmonizome is a collection of information about genes and proteins from 114 datasets provided by 66 online resources Thanks to technological advances in genomics, transcriptomics, proteomics, metabolomics, and related fields, projects that generate a large number of measurements of the properties of cells, tissues, model organisms, and patients are becoming commonplace in biomedical research
  • Whats New in Harmonizome 3. 0? - maayanlab. cloud
    What's New in Harmonizome 3 0? New Datasets Disease or Phenotype Associations ClinVar Gene-Phenotype Associations 2025 SNP-phenotype associations curated by ClinVar users from various sources 4490 genes, 5719 phenotypes, 17744 associations DISEASES Curated Gene-Disease Association Evidence Scores 2025 Disease gene evidence scores by manual literature curation 3741 genes, 1573 diseases, 37742





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